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Epigenetic Regulation of ABCB1 Expression in Triple Negative Breast Cancer and its Impact on Taxane Resistance

Authors
  • Sunil Kumar Yadav

    Kalinga University, Naya Raipur, Chhattisgarh, India
  • Brijmohan Singh

    Kalinga University, Naya Raipur, Chhattisgarh, India
Keywords:
Triple-negative breast cancer, taxane resistance, ABCB1, epigenetics, DNA methylation, histone acetylation, miRNA, chemotherapy resistance, epigenetic inhibitors
Abstract

Objective: This research was conducted to examine the part played by epigenetic regulation in up-regulating the expression of ABCB1 (P-glycoprotein) and the role it contributes to the development of taxane resistance in triple-negative breast cancer (TNBC).

Methods: Taxane-sensitive and taxane-resistant TNBC cell lines (e.g., MDA-MB-231) were subjected to the evaluation of the ABCB1 expression with the help of the quantitative PCR (qPCR) and the Western blotting procedures. Bisulfite sequencing, chromatin immunoprecipitation (ChIP), and miRNA profiling were used to study epigenetic alterations such as DNA methylation, changes in histone activity (acetylation), and miRNAs, respectively. To test the reversal of resistance, epigenetic inhibitors were utilized and included 5-aza-2'-deoxycytidine and trichostatin A. Patient-derived TNBC samples were used to make clinical correlations that established the connection between the status of ABCB1 methylation and the response to chemotherapy.

Findings: The expression of ABCB1 in taxane-resistant cells was found to be much higher in comparison to that of sensitive cells, as determined by both mRNA and protein. The DNA analysis of the methylation of the promoter of the ABCB1 showed that it is hypomethylated in the resistant cells, and the histone acetylation of ABCB1 was also significantly elevated in the resistant cells. miR-451 and miR-335, which regulate ABCB1, were suppressed in the resistant cells. ABCB1 overexpression was reversed by treatment with epigenetic inhibitors, and sensitivity to taxanes was restored. It was found that low levels of methylation of the promoter of ABCB1 were linked to ineffective taxane chemotherapy response in patients with TNBC.

Conclusion: Taxane resistance in TNBC occurs with the help of epigenetic regulation of ABCB1. The significant contributors to the overexpression of ABCB1 are DNA hypomethylation, histone acetylation, and miRNA dysregulation. Epigenetic therapies, as an adjunct to the taxane chemotherapy, are one such promising approach that could be used to overcome drug resistance in TNBC, and they should be further explored in clinical trials.

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References

[1] Cevatemre B, Bulut I, Dedeoglu B, Isiklar A, Syed H, Bayram OY, Acilan C. Exploiting epigenetic targets to overcome taxane resistance in prostate cancer. Cell Death & Disease 2024; 15(2): 132.

[2] Yedier-Bayram O, Cingöz A, Yilmaz E, Aksu AC, Esin B, Degirmenci N, Bagci-Onder T. Chromatin-focused genetic and chemical screens identify BRPF1 as a targetable vulnerability in Taxol-resistant triple-negative breast cancer. Experimental & Molecular Medicine 2025; 57(6): 1294-1307.

[3] Zappe K, Cichna-Markl M. Aberrant DNA methylation of ABC transporters in cancer. Cells 2020; 9(10): 2281.

[4] Ferrari P, Scatena C, Ghilli M, Bargagna I, Lorenzini G, Nicolini A. Molecular mechanisms, biomarkers and emerging therapies for chemotherapy resistant TNBC. International Journal of Molecular Sciences 2022; 23(3): 1665.

[5] Das S, Ghosh S, Hansda S. Epigenetic Regulation in Chemotherapy Resistance of Breast Cancer: Role of Chromatin Modifications and Non-Coding RNAs in Chemotherapeutic Resistance. Diseases & Research 2025; 5(4): 199-216.

[6] Gronkowska K, Kołacz-Milewska K, Skoczylas S, Nagy É, Jacenik D, Székvölgyi L, Strachowska M. SMARCA1 regulates PARP1-dependent ABC transporters expression and mediates doxorubicin resistance in triple-negative breast cancer. Biomedicine & Pharmacotherapy 2025; 192: 118698.

[7] Ray SK, Mukherjee S. Epigenetic reprogramming and landscape of transcriptomic interactions: Impending therapeutic interference of triple-negative breast cancer in molecular medicine. Current Molecular Medicine 2022; 22(10): 835-850.

[8] Chen H, Zhang M, Deng Y. Long noncoding RNAs in Taxane resistance of breast cancer. International Journal of Molecular Sciences 2023; 24(15): 12253.

[9] Lee J, Kwon Y. Topoisomerase Inhibitor Resistance in Breast Cancer: Exploring Alterations in Cellular Metabolism and Properties Driving Drug Insensitivity. Drug Targets and Therapeutics 2025; 4(2): 185-209.

[10] Saha S, Mahapatra S, Khanra S, Mishra B, Swain B, Malhotra D, Kundu GC. Decoding breast cancer treatment resistance through genetic, epigenetic, and immune-regulatory mechanisms: from molecular insights to translational perspectives. Cancer Drug Resistance 2025; 8: 36.

[11] Modi A, Roy D, Sharma S, Vishnoi JR, Pareek P, Elhence P, Purohit P. ABC transporters in breast cancer: their roles in multidrug resistance and beyond. Journal of Drug Targeting 2022; 30(9): 927-947.

[12] Tsyganov MM, Ibragimova MK, Gaptulbarova KA, Tsydenova IA, Dolgasheva DS, Garbukov EY, Litvyakov NV. DNA Copy number aberrations and expression of ABC transporter genes in breast tumour: correlation with the effect of neoadjuvant chemotherapy and prognosis of the disease. Pharmaceutics 2022; 14(5): 948.

[13] Lopez-Camacho E, Trilla-Fuertes L, Gamez-Pozo A, Dapía I, Lopez-Vacas R, Zapater-Moros A, Espinosa E. Synergistic effect of antimetabolic and chemotherapy drugs in triple-negative breast cancer. Biomedicine & Pharmacotherapy 2022; 149: 112844.

[14] Modi A, Roy D, Sharma S, Vishnoi JR, Pareek P, Elhence P, Purohit P. ABC transporters in breast cancer: their roles in multidrug resistance and beyond. Journal of Drug Targeting 2022; 30(9): 927-97.

[15] Karami Fath M, Azargoonjahromi A, Kiani A, Jalalifar F, Osati P, Akbari Oryani M, Payandeh Z. The role of epigenetic modifications in drug resistance and treatment of breast cancer. Cellular & Molecular Biology Letters 2022; 27(1): 52.

[16] Cai WY, Cai XX, Fei YR, Ye R, Song DM, Hu D, Yang XX. DNA methylation and immune evasion in triple-negative breast cancer: challenges and therapeutic opportunities. Frontiers in Oncology 2025; 15: 1534055.

[17] Błaszczak E, Miziak P, Odrzywolski A, Baran M, Gumbarewicz E, Stepulak A. Triple-negative breast cancer progression and drug resistance in the context of epithelial–mesenchymal transition. Cancers 2025; 17(2): 228.

[18] Barhela K, Chaudhary AA, Mishra R, Nupur N, Magani SKJ, Rudayni HA, Kumar B. Interplay between Epigenetic and Transcription Factors Mediating Drug Resistance via Stem Cells in Breast Cancer. ACS Omega 2025; 10(50): 61140-61158.

[19] Kordias D, Kostara CE, Papadaki S, Verigos J, Bairaktari E, Magklara A. Omics analysis of chemoresistant triple negative breast cancer cells reveals novel metabolic vulnerabilities. Cells 2022; 11(17): 2719.

[20] Ebrahimi A, Shahrebabaki PB, Fouladi H, Derakhshan SM. The impact of microRNAs on the resistance of breast cancer subtypes to chemotherapy. Pathology-Research and Practice 2023; 249: 154702.

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Published
12-06-2026
Section
Articles

How to Cite

Epigenetic Regulation of ABCB1 Expression in Triple Negative Breast Cancer and its Impact on Taxane Resistance. (2026). Journal of Cancer Research Updates, 15(1), 156-167. https://doi.org/10.30683/1929-2279.2026.15.14

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